News

May 2017

• 

  Our work on online multi-task learning accepted by TKDE

  1 min read · Sat, May 6 2017

  News

  ​​Congratulates Peng Yang on his work on developing a robust online multi-task learning with correlative and personalized structures, which was accepted by IEEE Transactions on Knowledge and Data Engineering (TKDE).

April 2017

• 

  SFB Group graduated its third PhD student - Dr. Ibrahim Alabdulmohsin!

  1 min read · Sun, Apr 9 2017

  News

  machine learning algorithm

  Congratulates the SFB group on graduating its third Ph.D. student, Dr. Ibrahim Alabdulmohsin.
• 

  Our work on mining growth phenotype data accepted by Bioinformatics

  1 min read · Sat, Apr 1 2017

  News

  genome algorithm

  ​​Congratulates Majed and Hiro on their work on developing a novel constant-column biclustering algorithm for mining co-fit genes from genome-scale growth phenotype data which was accepted by Bioinformatics.

March 2017

• 

  Professors discuss big data and human health in latest Sci-Café

  1 min read · Mon, Mar 13 2017

  News

  machine learning big data artificial intelligence comparative genomics biomedical data human health

  ​Professors Takashi Gojobori, Xin Gao and Robert Hoehndorf spoke about big data and human health at the Sci-Café event held on February 27. Their talk, which was moderated by James Calvin, Vice President for Academic Affairs, aimed to answer the question, "Can Big Data Solve My Health Problems?" This event was open to all members of the KAUST community.

December 2016

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  Our work on multi-instance dictionary learning accepted by Pattern Recognition

  1 min read · Wed, Dec 21 2016

  News

  Congratulates Jingyan on his work on multi-instance dictionary learning via multivariate performance optimization which was accepted by Pattern Recognition.

August 2016

• 

  Congratulates Xuefeng for his tenure-track AP position at Tsinghua!

  1 min read · Thu, Aug 25 2016

  News

  Xuefeng becomes a PI at Tsinghua

July 2016

• 

  Congratulates Jingyan for his Research Scientist position at NYU Abu Dhabi!

  1 min read · Sat, Jul 16 2016

  News

  Jingyan becomes a Research Scientist at NYU Abu Dhabi

April 2016

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  SFB Group graduated its second PhD student - Dr. Abdullah Khamis!

  1 min read · Wed, Apr 27 2016

  News

  The second Ph.D. graduated from SFB Group.
• 

  Our work on protein homology detection through cross-modal learning accepted by ISMB2016 and Bioinformatics

  1 min read · Wed, Apr 20 2016

  News

  Congratulates Xuefeng and Jingyan for their work on developing a cross-modal learning framework for protein homology detection which is accepted by ISMB2016 and will appear in Bioinformatics.
• 

  Our biosynthesis pathway design server, MRE, published in NAR

  1 min read · Sun, Apr 17 2016

  News

  Congratulates Hiro, Meshari, and Xuefeng on their work on MRE, a web tool to suggest foreign enzymes for the biosynthesis pathway design with competing endogenous reactions in mind which was published in Nucleic Acids Research.

December 2015

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  SFB Group graduated its first PhD student - Dr. Ahmed Abbas!

  1 min read · Fri, Dec 18 2015

  News

  First Ph.D. graduated from SFB Group.

November 2015

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  Our work on multivariate performance optimization from multi-view data accepted by AAAI-16

  1 min read · Thu, Nov 12 2015

  News

  AAAI16Wang

October 2015

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  Our work on translational bursting published in Integrative Biology

  1 min read · Fri, Oct 30 2015

  News

  Integrative Bio Kuwahara

September 2015

• 

  Our work on collective estimation of multiple bivariate functions published in JASA

  1 min read · Thu, Sep 17 2015

  News

  Congratulates Xin on his joint work with Prof. Jianhua Huang at Texas A&M University on the collective estimation of multiple bivariate density functions with application to angular-sampling-based protein loop modeling that was published in JASA.

August 2015

• 

  Our drug repositioning framework published in Bioinformatics

  1 min read · Wed, Aug 12 2015

  News

  BioinformaticsNaveed

July 2015

• 

  Our work on structural alignment of interaction interfaces presented at ISMB2015

  1 min read · Tue, Jul 14 2015

  News

  Congratulates Xuefeng on presenting his work on the structural alignment of biomolecular interaction interfaces at ISMB2015 conference.

June 2015

• 

  Our work on parameter estimation methods for gene circuits published in Briefings in Bioinformatics

  1 min read · Mon, Jun 29 2015

  News

  Congratulates Ming, Hiro, and Xiaolei on their work on parameter estimation methods for gene circuit modeling from time-series mRNA data which was published in Briefings in Bioinformatics.

May 2015

• 

  Finding the Face in the Crowd

  1 min read · Sat, May 30 2015

  News

  Computer science statistics applied mathematics computational science

  An algorithm that maximizes the difference between data categories achieves high accuracy in classifying faces.

September 2013

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  Jingyan's paper is accepted by Knowledge-Based Systems

  1 min read · Thu, Sep 5 2013

  News

  Knowledge-Based Systems

August 2013

• 

  Two papers published at Pattern Recognition

  1 min read · Mon, Aug 19 2013

  News

  PatternRecognition

July 2013

• 

  Kuwahara's paper published at Scientific Reports

  1 min read · Fri, Jul 26 2013

  News

  Hiroyuki Kuwahara and Xin Gao coauthored a paper, "Stochastic effects as a force to increase the complexity of signaling networks", that was accepted by Scientific Reports (Nature Publishing Group).

April 2013

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  Two papers accepted by ISMB2013

  1 min read · Tue, Apr 23 2013

  News

  Two papers are accepted by ISMB2013 (The 21st International Conference on Intelligent Systems for Molecular Biology), to be held in Berlin, Germany, during July 21-23, 2013.

February 2013

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  International Conference on Biomolecular Dynamics: Experiment Meets Computation to be held at KAUST during Feb 23-25

  1 min read · Sat, Feb 23 2013

  News

  Xin Gao will chair the International Conference on Biomolecular Dynamics: Experiment Meets Computation to be held at KAUST during Feb 23-25.

January 2013

• 

  BH peak selection published at PLOS One

  1 min read · Mon, Jan 7 2013

  News

  Ahmed Abbas' new NMR peak selection method that is based on the Benjamini-Hochberg algorithm is published by PLOS One.

September 2012

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  Protein function annotation methods published at Bioinformatics

  1 min read · Sat, Sep 15 2012

  News

  Mario Messih's protein function annotation methods that are based on domain order and recurrence is published at Bioinformatics.

July 2012

• 

  LagSVD accepted by Briefings in Bioinformatics

  1 min read · Mon, Jul 16 2012

  News

  Paper "Assessing protein conformational sampling methods based on bivariate lag-distributions of backbone angles" is accepted for publication at Briefings in Bioinformatics (IF: 5.202).

February 2012

• 

  WaVPeak published at Bioinformatics

  1 min read · Wed, Feb 8 2012

  News

  Article "WaVPeak: picking NMR peaks through wavelet-based smoothing and volume-based filtering" published at Bioinformatics (IF: 4.877).
• 

  Two papers accepted by BMC Bioinformatics

  1 min read · Wed, Feb 1 2012

  News

  Two articles "Combining automated peak tracking in SAR by NMR with structure-based backbone assignment from 15N-NOESY" and "ProDis-ContSHC: learning protein dissimilarity measures and hierarchical context coherently for protein-protein comparison in protein database retrieval" are accepted for publication on BMC Bioinformatics (IF: 3.03).

January 2012

• 

  ProClusEnsem published at Computers in Biology and Medicine

  1 min read · Wed, Jan 18 2012

  News

  Article "ProClusEnsem: predicting membrane protein types by fusing different models of pseudo amino acid composition" is accepted for publication at Computers in Biology and Medicine (IF: 1.112).

May 1987

• 

  SECOM is accepted for publication at PLoS ONE

  1 min read · Sat, May 23 1987

  News

  SECOM is accepted for publication at PLoS ONE